Dataset with samples from Individuals with Combined immunodeficiencies with associated or syndrome features:
1)- Hyper-IgE syndromes (HIES):
- AD-HIES (Job or Buckley Syndrome), Phenotype OMIM number 147060.
see PID classification: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659841/
Hyper IgE Recurrent Infection Syndrome (HIES or Job’s syndrome), is a rare disorder of immunity and connective tissue, typically manifest with boils, cyst-forming pneumonias, and extremely elevated serum IgE as well as retained primary dentition and bone abnormalities. Inheritance can be autosomal dominant.In order to identify a specific defect or gene of interest, we performed microarray expression analysis on samples from patients with Job's syndrome and from healthy control subjects.Keywords: time course
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Polymorphonuclear leukocytes (PMNs) and peripheral blood mononuclear cells (PBMCs) were isolated from whole blood from patients with Job's syndrome and healthy control subjects. PMNs and PBMCs were incubated with or without IgG- and C3bi-coated latex beads for 3 and 6 hours.
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Sample ID | !Sample Title | group |
---|---|---|
GSM211011 | PMN_control_0min_Patient1 | PMN Ctrl 0min |
GSM211012 | PMN_control_0min_Patient2 | PMN Ctrl 0min |
GSM211013 | PMN_control_0min_Patient3 | PMN Ctrl 0min |
GSM211014 | PMN_control_0min_Patient4 | PMN Ctrl 0min |
GSM211015 | PMN_control_0min_Patient5 | PMN Ctrl 0min |
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Sample ID | !Sample Title | Group |
---|---|---|
GSM211011 | PMN_control_0min_Patient1 |
PMN Ctrl 0min |
GSM211012 | PMN_control_0min_Patient2 |
PMN Ctrl 0min |
GSM211013 | PMN_control_0min_Patient3 |
PMN Ctrl 0min |
GSM211014 | PMN_control_0min_Patient4 |
PMN Ctrl 0min |
GSM211015 | PMN_control_0min_Patient5 |
PMN Ctrl 0min |
GSM211016 | PMN_LB_180min_Patient1 |
PMN LB 180min |
GSM211017 | PMN_LB_180min_Patient2 |
PMN LB 180min |
GSM211018 | PMN_LB_180min_Patient3 |
PMN LB 180min |
GSM211019 | PMN_LB_180min_Patient4 |
PMN LB 180min |
GSM211020 | PMN_LB_180min_Patient5 |
PMN LB 180min |
GSM211021 | PMN_control_180min_Patient1 |
PMN Ctrl 180min |
GSM211022 | PMN_control_180min_Patient2 |
PMN Ctrl 180min |
GSM211023 | PMN_control_180min_Patient3 |
PMN Ctrl 180min |
GSM211024 | PMN_control_180min_Patient4 |
PMN Ctrl 180min |
GSM211025 | PMN_control_180min_Patient5 |
PMN Ctrl 180min |
GSM211026 | PMN_LB_360min_Patient1 |
PMN LB 360min |
GSM211027 | PMN_LB_360min_Patient2 |
PMN LB 360min |
GSM211028 | PMN_LB_360min_Patient3 |
PMN LB 360min |
GSM211029 | PMN_LB_360min_Patient4 |
PMN LB 360min |
GSM211030 | PMN_LB_360min_Patient5 |
PMN LB 360min |
GSM211031 | PMN_control_360min_Patient1 |
PMN Ctrl 360min |
GSM211032 | PMN_control_360min_Patient2 |
PMN Ctrl 360min |
GSM211033 | PMN_control_360min_Patient3 |
PMN Ctrl 360min |
GSM211034 | PMN_control_360min_Patient4 |
PMN Ctrl 360min |
GSM211035 | PMN_control_360min_Patient5 |
PMN Ctrl 360min |
GSM211036 | PMN_control_0min_Patient6 |
PMN Ctrl 0min |
GSM211037 | PMN_control_0min_Patient7 |
PMN Ctrl 0min |
GSM211038 | PMN_control_0min_Patient8 |
PMN Ctrl 0min |
GSM211039 | PMN_control_0min_Patient9 |
PMN Ctrl 0min |
GSM211040 | PMN_control_0min_Patient10 |
PMN Ctrl 0min |
GSM211041 | PMN_LB_180min_Patient6 |
PMN LB 180min |
GSM211042 | PMN_LB_180min_Patient7 |
PMN LB 180min |
GSM211043 | PMN_LB_180min_Patient8 |
PMN LB 180min |
GSM211044 | PMN_LB_180min_Patient9 |
PMN LB 180min |
GSM211045 | PMN_LB_180min_Patient10 |
PMN LB 180min |
GSM211046 | PMN_control_180min_Patient6 |
PMN Ctrl 180min |
GSM211047 | PMN_control_180min_Patient7 |
PMN Ctrl 180min |
GSM211048 | PMN_control_180min_Patient8 |
PMN Ctrl 180min |
GSM211049 | PMN_control_180min_Patient9 |
PMN Ctrl 180min |
GSM211050 | PMN_control_180min_Patient10 |
PMN Ctrl 180min |
GSM211051 | PMN_LB_360min_Patient6 |
PMN LB 360min |
GSM211052 | PMN_LB_360min_Patient7 |
PMN LB 360min |
GSM211053 | PMN_LB_360min_Patient8 |
PMN LB 360min |
GSM211054 | PMN_LB_360min_Patient9 |
PMN LB 360min |
GSM211055 | PMN_LB_360min_Patient10 |
PMN LB 360min |
GSM211056 | PMN_control_360min_Patient6 |
PMN Ctrl 360min |
GSM211057 | PMN_control_360min_Patient7 |
PMN Ctrl 360min |
GSM211058 | PMN_control_360min_Patient8 |
PMN Ctrl 360min |
GSM211059 | PMN_control_360min_Patient9 |
PMN Ctrl 360min |
GSM211060 | PMN_control_360min_Patient10 |
PMN Ctrl 360min |
GSM211061 | PMN_control_0min_Patient11 |
PMN Ctrl 0min |
GSM211062 | PMN_control_0min_Patient12 |
PMN Ctrl 0min |
GSM211063 | PMN_control_0min_Patient13 |
PMN Ctrl 0min |
GSM211064 | PMN_control_0min_Patient14 |
PMN Ctrl 0min |
GSM211065 | PMN_LB_180min_Patient11 |
PMN LB 180min |
GSM211066 | PMN_LB_180min_Patient12 |
PMN LB 180min |
GSM211067 | PMN_LB_180min_Patient13 |
PMN LB 180min |
GSM211068 | PMN_LB_180min_Patient14 |
PMN LB 180min |
GSM211069 | PMN_control_180min_Patient11 |
PMN Ctrl 180min |
GSM211070 | PMN_control_180min_Patient12 |
PMN Ctrl 180min |
GSM211071 | PMN_control_180min_Patient13 |
PMN Ctrl 180min |
GSM211072 | PMN_control_180min_Patient14 |
PMN Ctrl 180min |
GSM211073 | PMN_LB_360min_Patient11 |
PMN LB 360min |
GSM211074 | PMN_LB_360min_Patient12 |
PMN LB 360min |
GSM211075 | PMN_LB_360min_Patient13 |
PMN LB 360min |
GSM211076 | PMN_LB_360min_Patient14 |
PMN LB 360min |
GSM211077 | PMN_control_360min_Patient11 |
PMN Ctrl 360min |
GSM211078 | PMN_control_360min_Patient12 |
PMN Ctrl 360min |
GSM211079 | PMN_control_360min_Patient13 |
PMN Ctrl 360min |
GSM211080 | PMN_control_360min_Patient14 |
PMN Ctrl 360min |
GSM211081 | PMN_control_0min_Patient15 |
PMN Ctrl 0min |
GSM211082 | PMN_control_0min_Patient16 |
PMN Ctrl 0min |
GSM211083 | PMN_control_0min_Patient17 |
PMN Ctrl 0min |
GSM211084 | PMN_control_0min_Patient18 |
PMN Ctrl 0min |
GSM211085 | PMN_LB_180min_Patient15 |
PMN LB 180min |
GSM211086 | PMN_LB_180min_Patient16 |
PMN LB 180min |
GSM211087 | PMN_LB_180min_Patient17 |
PMN LB 180min |
GSM211088 | PMN_LB_180min_Patient18 |
PMN LB 180min |
GSM211089 | PMN_control_180min_Patient15 |
PMN Ctrl 180min |
GSM211090 | PMN_control_180min_Patient16 |
PMN Ctrl 180min |
GSM211091 | PMN_control_180min_Patient17 |
PMN Ctrl 180min |
GSM211092 | PMN_control_180min_Patient18 |
PMN Ctrl 180min |
GSM211093 | PMN_LB_360min_Patient15 |
PMN LB 360min |
GSM211094 | PMN_LB_360min_Patient16 |
PMN LB 360min |
GSM211095 | PMN_LB_360min_Patient17 |
PMN LB 360min |
GSM211096 | PMN_LB_360min_Patient18 |
PMN LB 360min |
GSM211097 | PMN_control_360min_Patient15 |
PMN Ctrl 360min |
GSM211098 | PMN_control_360min_Patient16 |
PMN Ctrl 360min |
GSM211099 | PMN_control_360min_Patient17 |
PMN Ctrl 360min |
GSM211100 | PMN_control_360min_Patient18 |
PMN Ctrl 360min |
GSM211101 | MO_control_0min_Patient1 |
PBMC Ctrl 0min |
GSM211102 | MO_control_0min_Patient2 |
PBMC Ctrl 0min |
GSM211103 | MO_control_0min_Patient3 |
PBMC Ctrl 0min |
GSM211104 | MO_control_0min_Patient4 |
PBMC Ctrl 0min |
GSM211105 | MO_control_0min_Patient5 |
PBMC Ctrl 0min |
GSM211106 | MO_control_0min_Patient6 |
PBMC Ctrl 0min |
GSM211107 | MO_control_0min_Patient7 |
PBMC Ctrl 0min |
GSM211108 | MO_control_0min_Patient8 |
PBMC Ctrl 0min |
GSM211109 | MO_control_0min_Patient9 |
PBMC Ctrl 0min |
GSM211110 | MO_control_0min_Patient10 |
PBMC Ctrl 0min |
GSM211111 | MO_control_0min_Patient12 |
PBMC Ctrl 0min |
GSM211112 | MO_control_0min_Patient13 |
PBMC Ctrl 0min |
GSM211113 | MO_control_0min_Patient14 |
PBMC Ctrl 0min |
GSM211114 | MO_control_0min_Patient15 |
PBMC Ctrl 0min |
GSM211115 | MO_control_0min_Patient16 |
PBMC Ctrl 0min |
GSM211116 | MO_control_0min_Patient17 |
PBMC Ctrl 0min |
GSM211117 | MO_control_0min_Patient18 |
PBMC Ctrl 0min |
GSM211118 | MO_LB_180min_Patient1 |
PBMC LB 180min |
GSM211119 | MO_LB_180min_Patient2 |
PBMC LB 180min |
GSM211120 | MO_LB_180min_Patient3 |
PBMC LB 180min |
GSM211121 | MO_LB_180min_Patient4 |
PBMC LB 180min |
GSM211122 | MO_LB_180min_Patient5 |
PBMC LB 180min |
GSM211123 | MO_LB_180min_Patient6 |
PBMC LB 180min |
GSM211124 | MO_LB_180min_Patient7 |
PBMC LB 180min |
GSM211125 | MO_LB_180min_Patient8 |
PBMC LB 180min |
GSM211126 | MO_LB_180min_Patient9 |
PBMC LB 180min |
GSM211127 | MO_LB_180min_Patient10 |
PBMC LB 180min |
GSM211128 | MO_LB_180min_Patient12 |
PBMC LB 180min |
GSM211129 | MO_LB_180min_Patient13 |
PBMC LB 180min |
GSM211130 | MO_LB_180min_Patient14 |
PBMC LB 180min |
GSM211131 | MO_LB_180min_Patient15 |
PBMC LB 180min |
GSM211132 | MO_LB_180min_Patient16 |
PBMC LB 180min |
GSM211133 | MO_LB_180min_Patient17 |
PBMC LB 180min |
GSM211134 | MO_LB_180min_Patient18 |
PBMC LB 180min |
GSM211135 | MO_control_180min_Patient1 |
PBMC Ctrl 180min |
GSM211136 | MO_control_180min_Patient2 |
PBMC Ctrl 180min |
GSM211137 | MO_control_180min_Patient3 |
PBMC Ctrl 180min |
GSM211138 | MO_control_180min_Patient4 |
PBMC Ctrl 180min |
GSM211139 | MO_control_180min_Patient5 |
PBMC Ctrl 180min |
GSM211140 | MO_control_180min_Patient6 |
PBMC Ctrl 180min |
GSM211141 | MO_control_180min_Patient7 |
PBMC Ctrl 180min |
GSM211142 | MO_control_180min_Patient8 |
PBMC Ctrl 180min |
GSM211143 | MO_control_180min_Patient9 |
PBMC Ctrl 180min |
GSM211144 | MO_control_180min_Patient10 |
PBMC Ctrl 180min |
GSM211145 | MO_control_180min_Patient12 |
PBMC Ctrl 180min |
GSM211146 | MO_control_180min_Patient13 |
PBMC Ctrl 180min |
GSM211147 | MO_control_180min_Patient14 |
PBMC Ctrl 180min |
GSM211148 | MO_control_180min_Patient15 |
PBMC Ctrl 180min |
GSM211149 | MO_control_180min_Patient16 |
PBMC Ctrl 180min |
GSM211150 | MO_control_180min_Patient17 |
PBMC Ctrl 180min |
GSM211151 | MO_control_180min_Patient18 |
PBMC Ctrl 180min |
Name | ||
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All Samples | View | |
PBMC | Default | View |
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Group Set | |
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All Samples | |
PBMC |