- Dataset with samples from Individuals with Congenital defects of phagocyte number, functions, or both:
1- Congenital neutropenia, P14/LAMTOR2 deficiency, Phenotype OMIM number 610798.
see PID classification: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659841/
see publication: https://www.ncbi.nlm.nih.gov/pubmed/24092934
Lysosome-related organelles have versatile functions including protein and lipid degradation, signal transduction, and protein secretion. The molecular elucidation of rare congenital diseases affecting endosomal/lysosomal biogenesis has given insights into physiological functions of the innate and adaptive immune system.. Here, we describe a novel human primary immunodeficiency disorder and provide evidence that the endosomal adaptor protein p14, previously characterized as confining mitogen-activated-protein-kinase (MAPK) signaling to late endosomes, is critical for the function of neutrophils, B-cells, cytotoxic T-cells and melanocytes. Combining genetic linkage studies and transcriptional profiling analysis, we identified a homozygous point mutation in the 3’ UTR of p14 (also known as MAPBPIP), resulting in decreased protein expression. In p14-deficient cells, the distribution of late endosomes was severely perturbed, suggesting a novel role for p14 in endosomal biogenesis. These findings have implications for understanding endosomal membrane dynamics, compartmentalization of cell signal cascades, and their role in immunity. Keywords: Interindividual comparison.
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EBV-transformed B cell lines from 2 parents and 2 affected children
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Sample ID | !Sample Title | tissue | group | Genetic modification |
---|---|---|---|---|
GSM146336 | child #12 | B-cells | child 12 | TRUE |
GSM146337 | Father #1 | B-cells | Father 1 | TRUE |
GSM146338 | child #13 | B-cells | child 13 | TRUE |
GSM146339 | Mother #2 | B-cells | Mother 2 | TRUE |
All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.
Sample ID | !Sample Title | Tissue | Group | Genetic modification |
---|---|---|---|---|
GSM146336 | child #12 |
B-cells |
child 12 |
TRUE |
GSM146337 | Father #1 |
B-cells |
Father 1 |
TRUE |
GSM146338 | child #13 |
B-cells |
child 13 |
TRUE |
GSM146339 | Mother #2 |
B-cells |
Mother 2 |
TRUE |
Name | ||
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