SIDRA
Sample Set Annotation Tool
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Groups
Control no stimulation 2h
400002880: GSM1003015
400002886: GSM1003021
400002892: GSM1003027
0
samples selected
Move selected samples to group
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
MYD88 no stimulation 2h
400002898: GSM1003033
400002904: GSM1003039
0
samples selected
Move selected samples to group
Control no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
HOIL no stimulation 2h
400002913: GSM1003048
400002919: GSM1003054
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
Control IL1b 2h
400002878: GSM1003013
400002884: GSM1003019
400002890: GSM1003025
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
MYD88 IL1b 2h
400002896: GSM1003031
400002902: GSM1003037
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
HOIL IL1b 2h
400002911: GSM1003046
400002917: GSM1003052
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
Control TNFa 2h
400002882: GSM1003017
400002888: GSM1003023
400002894: GSM1003029
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
MYD88 TNFa 2h
400002900: GSM1003035
400002906: GSM1003041
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
HOIL TNFa 2h
400002915: GSM1003050
400002921: GSM1003056
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
Control no stimulation 6h
400002881: GSM1003016
400002887: GSM1003022
400002893: GSM1003028
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
MYD88 no stimulation 6h
400002899: GSM1003034
400002905: GSM1003040
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
HOIL no stimulation 6h
400002909: GSM1003044
400002914: GSM1003049
400002920: GSM1003055
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
Control IL1b 6h
400002879: GSM1003014
400002885: GSM1003020
400002891: GSM1003026
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
MYD88 IL1b 6h
400002897: GSM1003032
400002903: GSM1003038
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
HOIL IL1b 6h
400002908: GSM1003043
400002912: GSM1003047
400002918: GSM1003053
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
Control TNFa 6h
400002883: GSM1003018
400002889: GSM1003024
400002895: GSM1003030
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
MYD88 TNFa 6h
400002901: GSM1003036
400002907: GSM1003042
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
HOIL TNFa 6h
Move
Create sample set from this group
HOIL TNFa 6h
400002910: GSM1003045
400002916: GSM1003051
400002922: GSM1003057
0
samples selected
Move selected samples to group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
Move
Create sample set from this group
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New Group
Name
Split Group Set
Split Using
!Sample Title
Cell type
Disease state
Group
Stimulation
Subject
Time
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Name
Display Order
Move
Move this group to
before
after
Control no stimulation 2h
MYD88 no stimulation 2h
HOIL no stimulation 2h
Control IL1b 2h
MYD88 IL1b 2h
HOIL IL1b 2h
Control TNFa 2h
MYD88 TNFa 2h
HOIL TNFa 2h
Control no stimulation 6h
MYD88 no stimulation 6h
HOIL no stimulation 6h
Control IL1b 6h
MYD88 IL1b 6h
HOIL IL1b 6h
Control TNFa 6h
MYD88 TNFa 6h
HOIL TNFa 6h
Move
Color
Create Groups
Split by
!Sample Title
Cell type
Disease state
Group
Stimulation
Subject
Time
(split into
45
groups)
Ex:
PBMC C1 Non stimulate -2h 6334175027_F, PBMC C1 Non stimulate -6h 6334175046_L, PBMC C2 Non stimulate -2h 6334175044_H, PBMC C2 Non stimulate -6h 6334175044_A, PBMC P1 Non stimulate -6h 6334175026_H
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release